Australia and the Americas had an extremely diverse fauna of large beasts (giant wombats and kangeroos in Australia; elephants, bears, big cats, camelids, ground sloths etc in the Americas) until the last glaciation and the warming period that led into the Holocene interglacial. The majority of these megafauna species vanished suddenly during that recent period. To a lesser extent something similar happened in Eurasia, but nothing significant in Africa. Because the last glacial cycle also saw migration of efficient human hunter-gatherers to every other continent except Antarctica, many ecologists, palaeontologists and anthropologists saw a direct link between human predation and the mass extinction (see Earth-Pages of April 2012. Earlier humans had indeed spread far and wide in Eurasia before, and the crude hypothesis that the last arrivals in Australasia and the Americas devoured all the meatiest prey in three continents had some traction as a result: predation in Eurasia and Africa by earlier hominids would have made surviving prey congenitally wary of bipeds with spears. In Australia and the Americas the megafauna species would have been naive and confident in their sheer bulk, numbers, speed and, in some cases, ferocity. Other possibilities emerged, such as the introduction of viruses to which faunas had no immunity or as a result of climate change, but none of the three possibilities has gained incontrovertible proof. But the most popular, human connection has had severe knocks in the last couple of years. A fourth, that the extinctions stemmed from a comet impact proved to have little traction.
Since the amazing success of analysing the bulk DNA debris in sea water – environmental DNA or eDNA – to look at the local diversity of marine animals, the analytical and computing techniques that made it possible have been turned to ancient terrestrial materials: soils, permafrost and glacial ice. One of the first attempts revealed mammoth and pre-Columbian horse DNA surviving in Alaskan permafrost, thanks to the herds’ copious urination and dung spreading. Several articles in the 24 July 2015 issue of Science review ancient DNA advances, including eDNA from soils that chart changes in both fauna and flora over the last glacial cycle (Pennisi, E. 2015. Lost worlds found. Science, v. 349, p. 367-369). Combined with a variety of means of dating the material that yield the ancient eDNA, an interesting picture is emerging. The soil and permafrost samples potentially express ancient ecosystems in far more detail than would fossil animals or pollens, many of which are too similar to look at the species level and in any case are dominated by the most abundant plants rather than showing those critical in the food chain.
The first major success in palaeoecology of this kind came with a 50-author paper using eDNA ‘bar-coding’ of permafrost from 242 sites in Siberia and Alaska IWillerslev, E. and 49 others 2014. Fifty thousand years of Arctic vegetation and megafaunal diet. Nature, v. 506, p. 47-51. doi:10.1038/nature12921). Dividing the samples into 3 time spans – 50-25, 25-15 (last glacial maximum) and younger than 15 ka – the team found these major stages in the last glacial cycle mapped an ecological change from a dry tundra dominated by abundant herbaceous plants (forbs including abundant anemones and forget-me-not), to a markedly depleted Arctic steppe ecosystem then moist tundra with woody plants and grasses dominating. They also analysed the eDNA of dung and gut contents from ice-age megafauna, such as mammoths, bison and woolly rhinos, where these were found, which showed that forbs were the mainstay of their diet. Using bones of large mammals 6 member of the team also established the timing of extinctions in the last 56 ka (Cooper, A. et al. 2015. Abrupt warming events drove Late Pleistocene Holarctic megafaunal turnover. Science, DOI: 10.1126/science.aac4315), showing 31 regional extinction pulses linked to the rapid ups and downs of climate during Dansgaard-Oeschger cycles in the run-up to the last glacial maximum. By the end of the last glacial maximum, the megafauna were highly stressed by purely climatic and ecological factors. Human predation probably finished them off.